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When SuperDuper! gets a "script" command to quit, it'll wait up to 30 seconds past the last UI access before actually exiting (to make sure that a background script can't quit the application out from under an active user). But that would end up quitting, and what you guys are describing doesn't make much sense, on a manual backup.
I just don't know how to make it happen in a way that can be reproduced and fixed.
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--Dave Nanian
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