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I have a similar problem
However, my SuperDuper wasn't running at the time. I have a backup from 6 June 2008 and I'm up and running on the new disk. I can read the backup volume but I can't boot from it nor can I repair permissions. I can't run SuperDuper to move the stuff back to my new drive, because SuperDuper is only on the backup and I get a special permissions error if I try to copy it back to the new hard drive.
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